Hello!
yes, excessive engine blow-by can certainly cause a rear main seal to leak. If there was enough blow-by to push the PCV valve out, then there is an internal engine problem and they should replace it under warranty for you. Excessive blow-by will cause crankcase pressure to be high, forcing oil out through any weak point it can find (shch as an oil seal).
The only possible causes for excessive blow-by (combustion pressure leakage into the oil pan) are (1) Improperly machined cylinder walls (2) Improperly fitted piston rings (3) Piston ring gaps aligned due to improper installation (4) Broken piston ring due to improper assembly (5) broken piston.
This is not a fault of the shop that performed the installation; the symptoms you describe are due to an internal engine fault. therefore, the company that remanufactured the engine should cover the parts and labor needed to correct the problem.
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